The goal of this project is to develop an archival data format and a formal task specification language to serve as standards for describing behavioral experiments. Because different laboratories use different behavioral systems, hardware, and software, it has been difficult to communicate behavioral task design, share data, or reproduce experiments. To fill this gap, we have assembled a team that includes neuroscientists with extensive behavioral experience, a computer science expert in real-time formal language design, and scientific software engineers. To meet the needs of the broader community, we have formed a large consortium of laboratories, including BRAIN-initiative grantees that have supplied numerous use cases spanning the range of behavioral tasks.
In Aim 1, we will identify requirements for behavioral data formats by convening a large consortium of experimentalists. To represent behavioral data, we will create an extension to the NWB:N format to facilitate analysis alongside other behavior types. To specify behavioral contingencies, we will develop a formal BEhAvioral task Description Language (BEADL) using the latest computer science techniques for real-time language design.
In Aim 2, we will develop an open-source software suite for editing, executing and visualizing behavioral tasks. The software will interpret the same behavior into machine code for hardware controllers, or publication figures for humans. To ensure the standards address the needs of the community, we will collaborate with users and consortium labs to implement an extensive battery of published tasks.
In Aim 3, we will expand our outreach to broaden adoption of behavioral task description and data formats. We will engage the broader community through web-based tutorials, hackathons, and workshops at major conferences, and will encourage feedback. A publication-ready, graphical BEADL format will be developed to generate summary figures for behavioral tasks that are formal, yet easy to understand.

Public Health Relevance

We propose to develop an archival data format for behavioral neuroscience, including a formal task specification language, to serve as standards for describing behavioral experiments. We brought together a broad consortium of researchers to produce behavioral data standards, develop software tools for their use and validate them across laboratories, in order to improve sharing, rigor and reproducibility of behavioral neuroscience experiments.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Multi-Year Funded Research Project Grant (RF1)
Project #
1RF1MH120034-01
Application #
9795228
Study Section
Special Emphasis Panel (ZMH1)
Program Officer
Zhan, Ming
Project Start
2019-08-02
Project End
2021-07-31
Budget Start
2019-08-02
Budget End
2021-07-31
Support Year
1
Fiscal Year
2019
Total Cost
Indirect Cost
Name
Cold Spring Harbor Laboratory
Department
Type
DUNS #
065968786
City
Cold Spring Harbor
State
NY
Country
United States
Zip Code
11724