This proposal seeks funds to upgrade current electron paramagnetic resonance (EPR) equipment at the University of Florida (UF) for biomedical studies. We specifically wish to upgrade our Bruker ESP300e X-band continuous wave (CW) EPR spectrometer to a Bruker E500 X-band (9.5 GHz) and Q-band (35 GHz) CW EPR spectrometer with the variable temperature capabilities down to 1.8 K. The proposed upgrade will provide new capabilities above our current instrumentation to several research groups at UF and at the University of Central Florida (UCF). These include temperature capabilities to 1.8 K for metalloprotein EPR investigations and Q- band frequencies for enhanced spectral resolution and investigation of protein dynamics through a multi- frequency approach in natively unstructured proteins and membrane proteins. This instrument will also become part of the external users program at the National High Magnetic Field Laboratory (NHMFL) and be made available to requests world-wide through that program. In addition, this new spectrometer will relieve the burden of CW EPR experiments that are currently being performed on our single pulsed EPR spectrometer. Over ten Faculty at UF, along with outside collaborations, and two Faculty at UCF will benefit from the increased EPR time and capabilities offered by this upgrade. Several of the Faculty are within the Chemistry Department. Many are Users or collaborators from the College of Medicine;some are new faculty. The NIH funded research of biomedical systems requiring EPR experiments vary across our User base and include studies of nanoparticles, spin-trapping and dosimetry measurements with applications in radiation therapy and oxidative damage;characterization of metalloproteins and inorganic complexes involved in energy metabolism;site-directed spin- labeling (SDSL) studies of natively unstructured proteins that regulate cell cycle and are involved in oncology;SDSL studies of membrane proteins involved in lipid and nutrient transport, and SDSL studies of conformational sampling in natural polymorphisms and drug-resistant constructs of HIV-1 protease.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biomedical Research Support Shared Instrumentation Grants (S10)
Project #
1S10RR031603-01
Application #
8051278
Study Section
Special Emphasis Panel (ZRG1-IMST-G (30))
Program Officer
Levy, Abraham
Project Start
2011-07-15
Project End
2013-01-14
Budget Start
2011-07-15
Budget End
2013-01-14
Support Year
1
Fiscal Year
2011
Total Cost
$523,030
Indirect Cost
Name
University of Florida
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
969663814
City
Gainesville
State
FL
Country
United States
Zip Code
32611
Liu, Zhanglong; Casey, Thomas M; Blackburn, Mandy E et al. (2016) Pulsed EPR characterization of HIV-1 protease conformational sampling and inhibitor-induced population shifts. Phys Chem Chem Phys 18:5819-31
Smith, Adam N; Twahir, Umar T; Dubroca, Thierry et al. (2016) Molecular Rationale for Improved Dynamic Nuclear Polarization of Biomembranes. J Phys Chem B 120:7880-8
Liu, Zhanglong; Huang, Xi; Hu, Lingna et al. (2016) Effects of Hinge-region Natural Polymorphisms on Human Immunodeficiency Virus-Type 1 Protease Structure, Dynamics, and Drug Pressure Evolution. J Biol Chem 291:22741-22756
Esquiaqui, Jackie M; Sherman, Eileen M; Ye, Jing-Dong et al. (2016) Conformational Flexibility and Dynamics of the Internal Loop and Helical Regions of the Kink-Turn Motif in the Glycine Riboswitch by Site-Directed Spin-Labeling. Biochemistry 55:4295-305
Song, Likai; Liu, Zhanglong; Kaur, Pavanjeet et al. (2016) Toward increased concentration sensitivity for continuous wave EPR investigations of spin-labeled biological macromolecules at high fields. J Magn Reson 265:188-96
Casey, Thomas M; Fanucci, Gail E (2015) Spin labeling and Double Electron-Electron Resonance (DEER) to Deconstruct Conformational Ensembles of HIV Protease. Methods Enzymol 564:153-87
Carter, Jeffrey D; Gonzales, Estrella G; Huang, Xi et al. (2014) Effects of PRE and POST therapy drug-pressure selected mutations on HIV-1 protease conformational sampling. FEBS Lett 588:3123-8
Esquiaqui, Jackie M; Sherman, Eileen M; Ionescu, Sandra A et al. (2014) Characterizing the dynamics of the leader-linker interaction in the glycine riboswitch with site-directed spin labeling. Biochemistry 53:3526-8
Casey, Thomas M; Liu, Zhanglong; Esquiaqui, Jackie M et al. (2014) Continuous wave W- and D-band EPR spectroscopy offer ""sweet-spots"" for characterizing conformational changes and dynamics in intrinsically disordered proteins. Biochem Biophys Res Commun 450:723-8
Huang, Xi; Britto, Manuel D; Kear-Scott, Jamie L et al. (2014) The role of select subtype polymorphisms on HIV-1 protease conformational sampling and dynamics. J Biol Chem 289:17203-14

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