We have continued our analysis of assembly and maturation of HIV-1 and murine leukemia virus (MLV) particles. We previously reported that inositol phosphates have profound effects on the assembly properties of HIV-1 Gag protein (the structural protein of HIV-1 particles) in a defined assembly system. We have now localized the sites on Gag to which phosphatidylinositol 4,5-bisphosphate binds, using a mass spectrometric footprinting technique. Interestingly, this small molecule binds to sites near the N-terminus of the protein. This observation implies that this region (the """"""""matrix domain"""""""") has a major influence on the assembly process.We have studied MLV particles in which the first amino acid of the capsid protein (the protein making up the core structure of the mature virus particle) is altered by mutation. We find that these particles are totally noninfectious and are unable to copy their RNA into DNA upon entering a new host cell. In addition, particles containing a mixture of wild-type and mutant capsid molecules are severely impaired with respect to infectivity and DNA synthesis. These results show that the correct amino acid is required at this position in the capsid protein; even the presence of a minority of mutant capsid molecules is highly detrimental to viral functions. In addition, as a novel approach to analysis of viral particle structure, we analyzed the susceptibility of MLV particles to mechanical deformation using an atomic force microscope (AFM). We found that immature particles, composed of uncleaved Gag proteins, are far more resistant to deformation than mature particles, which contain cleavage products of Gag. However, the results of these experiments show that the outermost protein layer in mature particles contains a lattice or network of these molecules. The structure of this newly discovered lattice will require further analysis.

Agency
National Institute of Health (NIH)
Institute
Division of Basic Sciences - NCI (NCI)
Type
Intramural Research (Z01)
Project #
1Z01BC010511-04
Application #
7338624
Study Section
(RRL)
Project Start
Project End
Budget Start
Budget End
Support Year
4
Fiscal Year
2006
Total Cost
Indirect Cost
Name
Basic Sciences
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Datta, Siddhartha A K; Rein, Alan (2009) Preparation of recombinant HIV-1 gag protein and assembly of virus-like particles in vitro. Methods Mol Biol 485:197-208
Wilkinson, Kevin A; Gorelick, Robert J; Vasa, Suzy M et al. (2008) High-throughput SHAPE analysis reveals structures in HIV-1 genomic RNA strongly conserved across distinct biological states. PLoS Biol 6:e96
Rulli Jr, Samuel J; Mirro, Jane; Hill, Shawn A et al. (2008) Interactions of murine APOBEC3 and human APOBEC3G with murine leukemia viruses. J Virol 82:6566-75
Datta, Siddhartha A K; Zhao, Zhuojun; Clark, Patrick K et al. (2007) Interactions between HIV-1 Gag molecules in solution: an inositol phosphate-mediated switch. J Mol Biol 365:799-811
Datta, Siddhartha A K; Curtis, Joseph E; Ratcliff, William et al. (2007) Conformation of the HIV-1 Gag protein in solution. J Mol Biol 365:812-24
Rulli Jr, Samuel J; Hibbert, Catherine S; Mirro, Jane et al. (2007) Selective and nonselective packaging of cellular RNAs in retrovirus particles. J Virol 81:6623-31
Rulli Jr, S J; Muriaux, D; Nagashima, K et al. (2006) Mutant murine leukemia virus Gag proteins lacking proline at the N-terminus of the capsid domain block infectivity in virions containing wild-type Gag. Virology 347:364-71
Shkriabai, Nick; Datta, Siddhartha A K; Zhao, Zhuojun et al. (2006) Interactions of HIV-1 Gag with assembly cofactors. Biochemistry 45:4077-83
Yang, Quan-En; Stephen, Andrew G; Adelsberger, Joseph W et al. (2005) Discovery of small-molecule human immunodeficiency virus type 1 entry inhibitors that target the gp120-binding domain of CD4. J Virol 79:6122-33
Baumann, Jorg G; Unutmaz, Derya; Miller, Michael D et al. (2004) Murine T cells potently restrict human immunodeficiency virus infection. J Virol 78:12537-47

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