Eukaryotic transcriptional regulation 1. Breast cancer We have followed up our recent discovery of a novel genetic pathway involved in establishment of phenotype of breast cancer cells. Briefly, we have discovered that estrogen receptor alpha (ER-alpha) regulates the synthesis of a rate limiting component of a transcriptional corepressor complex, the Mi-2/NuRD (Nucleosome remodeling deacetylase) complex. This complex is utilized by ER-alpha to assist in establishment of the genetic program integral to specification of an epithelial phenotype in normal mammary glands as well as in breast tumors. Mi-2/NuRD directly regulates the transcription factor Snail, which has the capacity to mediate epithelial to mesenchymal transitions (EMT). We have recently discovered that Snail can directly repress transcription of ER-alpha as part of the EMT program in breast cancer cells. 2. B lymphocyte development and differentiation We have identified an unexpected gene regulatory paradigm critical to the development and differentiation pathway of B lymphocytes. Following development of a mature B cell, antigen exposure leads, in the presence of the appropriate cytokine environment, to initiation of the T lymphocyte dependent germinal center reaction. During this process, B lymphocytes undergo the unique biology leading to affinity selection of immunoglobulins, ultimately differentiating into antibody secreting plasma cells. The proto-oncogene BCL6 is a transcriptional repressor necessary for B lymphocytes to undergo the germinal center reaction. We have discovered a direct interaction between BCL6 and the Mi-2/NuRD complex that is essential for the cell fate decisions that characterize the germinal center reaction. We are currently investigating the molecules involved in direct regulation of both BCL6 and the Mi-2/NuRD complex in developing B lymphocytes, in germinal center B lymphocytes, and in plasma cells.

Agency
National Institute of Health (NIH)
Institute
National Institute of Environmental Health Sciences (NIEHS)
Type
Intramural Research (Z01)
Project #
1Z01ES101965-01
Application #
7174905
Study Section
(EDMP)
Project Start
Project End
Budget Start
Budget End
Support Year
1
Fiscal Year
2005
Total Cost
Indirect Cost
Name
U.S. National Inst of Environ Hlth Scis
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Duncan, Christopher G; Kondilis-Mangum, Hrisavgi D; Grimm, Sara A et al. (2018) Base-Resolution Analysis of DNA Methylation Patterns Downstream of Dnmt3a in Mouse Naïve B Cells. G3 (Bethesda) 8:805-813
Duncan, Christopher G; Grimm, Sara A; Morgan, Daniel L et al. (2018) Dosage compensation and DNA methylation landscape of the X chromosome in mouse liver. Sci Rep 8:10138
Li, Ruifang; Grimm, Sara A; Mav, Deepak et al. (2018) Transcriptome and DNA Methylome Analysis in a Mouse Model of Diet-Induced Obesity Predicts Increased Risk of Colorectal Cancer. Cell Rep 22:624-637
Wilczewski, Caralynn M; Hepperla, Austin J; Shimbo, Takashi et al. (2018) CHD4 and the NuRD complex directly control cardiac sarcomere formation. Proc Natl Acad Sci U S A 115:6727-6732
Qin, Yufeng; Roberts, John D; Grimm, Sara A et al. (2018) An obesity-associated gut microbiome reprograms the intestinal epigenome and leads to altered colonic gene expression. Genome Biol 19:7
Thomas, S Y; Whitehead, G S; Takaku, M et al. (2018) MyD88-dependent dendritic and epithelial cell crosstalk orchestrates immune responses to allergens. Mucosal Immunol 11:796-810
Zhang, Song; Takaku, Motoki; Zou, Liyun et al. (2017) Reversing SKI-SMAD4-mediated suppression is essential for TH17 cell differentiation. Nature 551:105-109
Shimbo, Takashi; Takaku, Motoki; Wade, Paul A (2016) High-quality ChIP-seq analysis of MBD3 in human breast cancer cells. Genom Data 7:173-4
Takaku, Motoki; Grimm, Sara A; Shimbo, Takashi et al. (2016) GATA3-dependent cellular reprogramming requires activation-domain dependent recruitment of a chromatin remodeler. Genome Biol 17:36
Takaku, Motoki; Grimm, Sara A; Wade, Paul A (2015) GATA3 in Breast Cancer: Tumor Suppressor or Oncogene? Gene Expr 16:163-8

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