Metabolic function and aging are complex traits that involve entire networks of changes at the molecular level, driven by genetic and environmental perturbations. To fully understand these changes, a systems biology approach needs to be taken. Using systems biology, we can investigate the myriad of interactions between the components of complex biological systems (e.g. an aging organism), and determine how these interactions give rise to the function and behavior of that system. The growth and development in the last decade of accurate and reliable mass data collection techniques (such as genomics and proteomics) has greatly enhanced our comprehension of molecular networks and cell signaling pathways. At the same time however, these technological advances have also increased the difficulty of satisfactorily analyzing and interpreting these ever-expanding datasets. At the present time, multiple diverse scientific communities including molecular, genetic, proteomic, bioinformatic, cell biological, and animal behavioral, are converging upon a common endpoint, i.e. the measurement, interpretation and potential prediction of molecular and behavioral activity from mass datasets. Our ever increasing appreciation of the complexity of biological systems has necessitated the generation of a new branch of informatics that more closely associates molecular functions to behavioral responses in living organisms. As currently systems biology analytical tools are lacking or need further development, we are aiming to further develop and expand existing proteomics techniques and we are creating bioinformatics software programs that can aid systems biology research. These include novel bioinformatics software programs that can cluster, visualize and functionally group large datasets, and proteomics techniques that can analyze proteins with low expression levels.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Investigator-Initiated Intramural Research Projects (ZIA)
Project #
1ZIAAG000916-03
Application #
8552504
Study Section
Project Start
Project End
Budget Start
Budget End
Support Year
3
Fiscal Year
2012
Total Cost
$203,430
Indirect Cost
Name
National Institute on Aging
Department
Type
DUNS #
City
State
Country
Zip Code
Maudsley, Stuart; Martin, Bronwen; Janssens, Jonathan et al. (2016) Informatic deconvolution of biased GPCR signaling mechanisms from in vivo pharmacological experimentation. Methods 92:51-63
Cai, Huan; Daimon, Caitlin M; Cong, Wei-Na et al. (2014) Longitudinal analysis of calorie restriction on rat taste bud morphology and expression of sweet taste modulators. J Gerontol A Biol Sci Med Sci 69:532-44
Chadwick, Wayne; Mitchell, Nicholas; Martin, Bronwen et al. (2012) Therapeutic targeting of the endoplasmic reticulum in Alzheimer's disease. Curr Alzheimer Res 9:110-9
Maudsley, S; Patel, S A; Park, S-S et al. (2012) Functional signaling biases in G protein-coupled receptors: Game Theory and receptor dynamics. Mini Rev Med Chem 12:831-40
Driscoll, Ira; Martin, Bronwen; An, Yang et al. (2012) Plasma BDNF is associated with age-related white matter atrophy but not with cognitive function in older, non-demented adults. PLoS One 7:e35217
Wu, Wells W; Wang, Guanghui; Insel, Paul A et al. (2012) Discovery- and target-based protein quantification using iTRAQ and pulsed Q collision induced dissociation (PQD). J Proteomics 75:2480-7
Stranahan, Alexis M; Martin, Bronwen; Maudsley, Stuart (2012) Anti-inflammatory effects of physical activity in relationship to improved cognitive status in humans and mouse models of Alzheimer's disease. Curr Alzheimer Res 9:86-92
Chadwick, Wayne; Martin, Bronwen; Chapter, Megan C et al. (2012) GIT2 acts as a potential keystone protein in functional hypothalamic networks associated with age-related phenotypic changes in rats. PLoS One 7:e36975
Hallböök, Tove; Ji, Sunggoan; Maudsley, Stuart et al. (2012) The effects of the ketogenic diet on behavior and cognition. Epilepsy Res 100:304-9
Shin, Yu-Kyong; Cong, Wei-na; Cai, Huan et al. (2012) Age-related changes in mouse taste bud morphology, hormone expression, and taste responsivity. J Gerontol A Biol Sci Med Sci 67:336-44

Showing the most recent 10 out of 34 publications