In collaboration with a Senior Investigator in the Axon Guidance and Neural Connectivity Section, NINDS, and with his post-doctoral fellow, and with members of the Biomedical Imaging Research Services Section of the Office of Intramural Research, CIT, we are studying the mechanisms that guide neurons axons to their ultimate targets. In particular, we are analyzing experiments that record the the growth of a neuron in the wing disc extracted from Drosophila larvae. During these experiments, we monitor the dynamics of a cytoskeletal protein, actin, at sub-micrometer resolution for periods up to an 1.5 hours in the growing axon as it senses it way through the muscle tissue of the disc. We are also examining the effects on the axon growth dynamics by mutations in a kinase that modulates the actin activity. A manuscript describing this work in now under peer review. In collaboration with a principal investigator and staff clinician in Section on Clinical Psychoneuroendocrinology and Neuropsychopharmacology, National Institute of Alcohol Abuse and Alcoholism, and with a staff scientist in the Mathematical and Statistical Laboratory, Office of Intramural Research, CIT, we are studying the factors that influence patients with alcohol use disorder (AUD) to seek treatment. This study involves analysis of hundreds of environmental, physiological, and psychiatric factors collected for each patient. A manuscript describing an alternative decision tree that shows the which factors differ between treatment-seeking and non-treatment seeking patients with AUD was published in EClinicalMedicine. In addition, we are applying methods from information theory to explore the spectrum of these factors in the AUD population. In collaboration with a consortium of investigators consisting of (1) a principal investigator and staff clinician in Section on Clinical Psychoneuroendocrinology and Neuropsychopharmacology, National Institute of Alcohol Abuse and Alcoholism, (2) a principal investigator and staff clinician in Cognitive Neuroscience and Psychopharmacology Section, Neuroimaging Research Branch, National Institute on Drug Abuse, and (3) a staff scientist in the Mathematical and Statistical Laboratory, Office of Intramural Research, CIT, we are investigating differences in the decision making process between addicts and non-addicts. In particular, we are comparing cocaine users to a set of non-smoking, non-addicted controls. We study their decision making process using a trust game approach in which players (the subjects) decide whether or not to trust each other or a randomized computer algorithm in dispensing financial gains or penalties. Our preliminary results suggest that cocaine users respond differently from non-using controls, especially in the initial stages of the game. From 2012 to 2017, the LI worked with a principal investigator in Section on Neuronal Connectivity, NICHD, (Chi-hon Lee) on statistical and topological analysis of retinal neurons growth in Drosophila. In FY 2018, Dr. Lee left the NIH to become the director of the Institute of Cellular and Organismic Biology, Academia Sinica, in Taipai, Taiwan. The LI and Dr. Lee, along with (1) two staff scientist in NICHD, and (2) members of the Biomedical Imaging Research Services Section of the Division of Computational Bioscience, CIT, are now finishing up their long-term collaboration. A manuscript describing this work in now under peer review. In FY 2019 the LI started a new collaboration with a PI in the Clinical Center Nursing Department to study gut microbiome in patents. The LI is also collaborating with (1) a PI from the Laboratory of Neurogenetics, National Institute on Alcohol Abuse and Alcoholism, and (2) a staff scientist from the Mathematical and Statistical Computing Laboratory, Center for Information Technology. Along with staff scientist Jennifer Barb from CIT, the LI presented a talk on improving estimates of population abundances at the 3rd NIH-FDA Joint Agency Microbiome Symposium held on the NIH campus. Dr Barb and the LI were invited to give a talk on the same subject at the 2019 NIST Workshop on Standards for Microbiome Measurements (to be held September 2019 at the NISt campus in Gaithersburg, MD). A manuscript describing the work on improving estimates of population abundances is now under referee review.

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Budget End
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7
Fiscal Year
2019
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Center for Information Technology
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Ting, Chun-Yuan; McQueen, Philip G; Pandya, Nishith et al. (2017) Analyzing Dendritic Morphology in Columns and Layers. J Vis Exp :
Luo, Jiangnan; McQueen, Philip G; Shi, Bo et al. (2016) Wiring dendrites in layers and columns. J Neurogenet 30:69-79
Hickey, Anthony; Esnault, Caroline; Majumdar, Anasuya et al. (2015) Single-Nucleotide-Specific Targeting of the Tf1 Retrotransposon Promoted by the DNA-Binding Protein Sap1 of Schizosaccharomyces pombe. Genetics 201:905-24
Glushakova, Svetlana; Balaban, Amanda; McQueen, Philip G et al. (2014) Hemoglobinopathic erythrocytes affect the intraerythrocytic multiplication of Plasmodium falciparum in vitro. J Infect Dis 210:1100-9
Chatterjee, Atreyi Ghatak; Esnault, Caroline; Guo, Yabin et al. (2014) Serial number tagging reveals a prominent sequence preference of retrotransposon integration. Nucleic Acids Res 42:8449-60
Ting, Chun-Yuan; McQueen, Philip G; Pandya, Nishith et al. (2014) Photoreceptor-derived activin promotes dendritic termination and restricts the receptive fields of first-order interneurons in Drosophila. Neuron 81:830-846
Jaeger, Ashley A; Das, Chandan K; Morgan, Nicole Y et al. (2013) Microfabricated polymeric vessel mimetics for 3-D cancer cell culture. Biomaterials 34:8301-13
McQueen, Philip G; Williamson, Kim C; McKenzie, F Ellis (2013) Host immune constraints on malaria transmission: insights from population biology of within-host parasites. Malar J 12:206
Billig, Erica M W; McQueen, Philip G; McKenzie, F Ellis (2012) Foetal haemoglobin and the dynamics of paediatric malaria. Malar J 11:396