We are carrying out studies of the histone modifications over the insulin gene locus and its neighborhood in human islet cells, in an attempt to identify long range regulatory influences that may affect insulin gene expression. We have identified an extended domain of open chromatin structure that includes not only the insulin gene, but also the upstream tyrosine hydroxylase gene and the downstream Igf2 and Igf2-AS genes. Unlike most loci, in which activating histone modifications are restricted to the neighborhood of gene promoters, these modifications are more or less uniformly distributed over the entire extended region. Transcripts, including from intergenic regions, can be detected throughout and are probably related to the distribution of histone modification marks. In other work, we are carrying out measurements of long range physical contacts within the nucleus between the insulin promoter and other genomic sites. We are now exploring these long-range interactions in order to determine whether they play a regulatory role coupling insulin expression to other genes important for insulin function.

Project Start
Project End
Budget Start
Budget End
Support Year
3
Fiscal Year
2009
Total Cost
$249,142
Indirect Cost
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State
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Jian, Xing; Felsenfeld, Gary (2018) Insulin promoter in human pancreatic ? cells contacts diabetes susceptibility loci and regulates genes affecting insulin metabolism. Proc Natl Acad Sci U S A 115:E4633-E4641
Xu, Zhixiong; Lefevre, Gaelle M; Gavrilova, Oksana et al. (2014) Mapping of long-range INS promoter interactions reveals a role for calcium-activated chloride channel ANO1 in insulin secretion. Proc Natl Acad Sci U S A 111:16760-5
Xu, Zhixiong; Felsenfeld, Gary (2012) Order from chaos in the nucleus. Mol Cell 48:327-8
Xu, Z; Lefevre, G M; Felsenfeld, G (2012) Chromatin structure, epigenetic mechanisms and long-range interactions in the human insulin locus. Diabetes Obes Metab 14 Suppl 3:1-11
Xu, Zhixiong; Wei, Gang; Chepelev, Iouri et al. (2011) Mapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription. Nat Struct Mol Biol 18:372-8
Mutskov, Vesco; Felsenfeld, Gary (2009) The human insulin gene is part of a large open chromatin domain specific for human islets. Proc Natl Acad Sci U S A 106:17419-24