The Biomedical Image Analysis and Services Section has a commitment to providing computational and engineering expertise to a variety of clinical and biomedical informatic activities at NIH. Specifically, PET, ultrasound, CT, MRI, microscopy, imaging in cancer research, and imaging related to neural dysfunction have been supported in a number of ways. To support science research in the NIH intramural program, CIT has developed and continues to enhance a sophisticated platform-independent, n-dimensional, extensible image processing and visualization application. The MIPAV (Medical Image Processing Analysis and Visualization) is an application that enables quantitative analysis and visualization of biomedical imaging modalities (from micro to macro) and is used by researchers at NIH and around the world. At NIH, MIPAV has been used to analyze anatomical structures in CT datasets, analysis of MRI datasets for NIMH, and has been used by NCI for the analysis of 2D and 3D microscopic samples. In addition, we manage and develop major components of the National Database for Autism Research (NDAR) project which is a collaborative biomedical informatics system created by the National Institutes of Health to provide a national resource to support and accelerate research in autism. NDAR is a collection of information systems supporting the full range of autism research activities, including genomic, imaging, laboratory, clinical, and behavioral data sources. It will provide the core technology for a data warehouse, and a centralized source for common measures and their documentation. NDAR will support large-scale, multi-site projects as well as pilot studies and basic science investigations. Another biomedical informatics project based on the NDAR system is in development to support Traumatic Brain Injury (TBI) research. Traumatic brain injury (TBI) is a major medical problem for both military and civilian populations. There are many critical gaps in our knowledge regarding how to diagnose and treat people who sustain a TBI. High priority gaps include the need for an objective diagnosis for mild TBI, biomarkers to track recovery or progression of injury, a biologically-based classification system, and comparative effectiveness research to determine which treatments are effective and for whom. To address these gaps, as well as other important questions on how to improve outcomes, the National Institutes of Health (NIH), in partnership with the Department of Defense (DoD), is building a secure, centralized informatics system (database) for traumatic brain injury research. It will serve as a central repository for new data, link to current databases and allow valid comparison of results across studies. The database builds upon a larger effort to create common data elements for the study of traumatic brain injury which are essentially definitions and guidelines about the kinds of data that should be collected, and how to collect these data in clinical studies. The Common Data Elements project emerged from a collaborative interagency effort involving over 50 American and European universities and several federal agencies, including NIH, the DoD, the Department of Veterans Affairs, the Center for Disease Prevention, and the National Institute on Disability and Rehabilitation Research within the Department of Education. Thus, the TBI informatics system is called the Federal Interagency TBI Research (FITBIR) database to acknowledge the interagency participation and shared interests. It is envisioned that FITBIR will serve as a repository for TBI research supported by multiple federal agencies and consolidate high quality, uniformly collected, and contemporary data that can be accessed and analyzed by scientific experts.

Agency
National Institute of Health (NIH)
Institute
Center for Information Technology (CIT)
Type
Scientific Computing Intramural Research (ZIH)
Project #
1ZIHCT000272-05
Application #
8565614
Study Section
Project Start
Project End
Budget Start
Budget End
Support Year
5
Fiscal Year
2012
Total Cost
$743,687
Indirect Cost
Name
Center for Information Technology
Department
Type
DUNS #
City
State
Country
Zip Code
Rosenthal, Liana S; Drake, Daniel; Alcalay, Roy N et al. (2016) The NINDS Parkinson's disease biomarkers program. Mov Disord 31:915-23
Ting, Chun-Yuan; McQueen, Philip G; Pandya, Nishith et al. (2014) Photoreceptor-derived activin promotes dendritic termination and restricts the receptive fields of first-order interneurons in Drosophila. Neuron 81:830-846
Wu, Yicong; Wawrzusin, Peter; Senseney, Justin et al. (2013) Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy. Nat Biotechnol 31:1032-8
Hall, Dan; Huerta, Michael F; McAuliffe, Matthew J et al. (2012) Sharing heterogeneous data: the national database for autism research. Neuroinformatics 10:331-9