Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Program Projects (P01)
Project #
5P01GM063208-05
Application #
7918543
Study Section
Special Emphasis Panel (ZRG1-BBCB (01))
Project Start
2006-04-01
Project End
2009-03-31
Budget Start
2006-04-01
Budget End
2009-03-31
Support Year
5
Fiscal Year
2006
Total Cost
$207,244
Indirect Cost
Name
University of California San Diego
Department
Type
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Porta-Pardo, Eduard; Godzik, Adam (2016) Mutation Drivers of Immunological Responses to Cancer. Cancer Immunol Res 4:789-98
Xie, Li; Ng, Clara; Ali, Thahmina et al. (2013) Multiscale modeling of the causal functional roles of nsSNPs in a genome-wide association study: application to hypoxia. BMC Genomics 14 Suppl 3:S9
Stegle, Oliver; Denby, Katherine J; Cooke, Emma J et al. (2010) A robust Bayesian two-sample test for detecting intervals of differential gene expression in microarray time series. J Comput Biol 17:355-67
Valas, Ruben E; Yang, Song; Bourne, Philip E (2009) Nothing about protein structure classification makes sense except in the light of evolution. Curr Opin Struct Biol 19:329-34
Podtelezhnikov, Alexei A; Wild, David L (2009) Reconstruction and stability of secondary structure elements in the context of protein structure prediction. Biophys J 96:4399-408
Veretnik, Stella; Wills, Christopher; Youkharibache, Philippe et al. (2009) Sm/Lsm genes provide a glimpse into the early evolution of the spliceosome. PLoS Comput Biol 5:e1000315
Briedis, Kristine M; Starr, Ayelet; Bourne, Philip E (2008) Analysis of the human kinome using methods including fold recognition reveals two novel kinases. PLoS One 3:e1597
Borgwardt, Karsten (2008) Predicting phenotypic effects of gene perturbations in C. elegans using an integrated network model. Bioessays 30:707-10
Xie, Lei; Bourne, Philip E (2008) Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments. Proc Natl Acad Sci U S A 105:5441-6
Chung, Jo-Lan; Wang, Wei; Bourne, Philip E (2007) High-throughput identification of interacting protein-protein binding sites. BMC Bioinformatics 8:223

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