Agency
National Institute of Health (NIH)
Institute
National Library of Medicine (NLM)
Type
Exploratory Grants (P20)
Project #
5P20LM007276-03
Application #
6656381
Study Section
Special Emphasis Panel (ZRG1-SSS-E (01))
Program Officer
Friedman, Charles P
Project Start
2001-09-30
Project End
2005-08-31
Budget Start
2003-09-01
Budget End
2005-08-31
Support Year
3
Fiscal Year
2003
Total Cost
$709,613
Indirect Cost
Name
Columbia University (N.Y.)
Department
Biochemistry
Type
Schools of Medicine
DUNS #
621889815
City
New York
State
NY
Country
United States
Zip Code
10032
Kundaje, Anshul; Middendorf, Manuel; Shah, Mihir et al. (2006) A classification-based framework for predicting and analyzing gene regulatory response. BMC Bioinformatics 7 Suppl 1:S5
Kundaje, Anshul; Middendorf, Manuel; Gao, Feng et al. (2005) Combining sequence and time series expression data to learn transcriptional modules. IEEE/ACM Trans Comput Biol Bioinform 2:194-202
Kuang, Rui; Ie, Eugene; Wang, Ke et al. (2005) Profile-based string kernels for remote homology detection and motif extraction. J Bioinform Comput Biol 3:527-50
Foat, Barrett C; Houshmandi, S Sean; Olivas, Wendy M et al. (2005) Profiling condition-specific, genome-wide regulation of mRNA stability in yeast. Proc Natl Acad Sci U S A 102:17675-80
Richards, Stephen; Liu, Yue; Bettencourt, Brian R et al. (2005) Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Res 15:1-18
Ziv, Etay; Koytcheff, Robin; Middendorf, Manuel et al. (2005) Systematic identification of statistically significant network measures. Phys Rev E Stat Nonlin Soft Matter Phys 71:016110
Zhang, Xiang H-F; Leslie, Christina S; Chasin, Lawrence A (2005) Dichotomous splicing signals in exon flanks. Genome Res 15:768-79
Middendorf, Manuel; Kundaje, Anshul; Wiggins, Chris et al. (2004) Predicting genetic regulatory response using classification. Bioinformatics 20 Suppl 1:i232-40
Kuang, Rui; Ie, Eugene; Wang, Ke et al. (2004) Profile-based string kernels for remote homology detection and motif extraction. Proc IEEE Comput Syst Bioinform Conf :152-60
Stolc, Viktor; Gauhar, Zareen; Mason, Christopher et al. (2004) A gene expression map for the euchromatic genome of Drosophila melanogaster. Science 306:655-60

Showing the most recent 10 out of 20 publications