The HIV-1 regulatory protein Tat plays a key role in the viral life cycle. Tat greatly increase the production of viral RNA by alleviating a defect in transcriptional elongation so that full-length viral transcripts can be generated. The mechanism by which this is accomplished is not well understood. Our recent studies have linked this increased efficiency of RNA chain elongation to a factor known as P-TEFb (positive transcription elongation factor b), newly-identified in human cells. P-TEFb is able to phosphorylate the carboxy-terminal domain (CTD) of the large subunit of RNA polymerase II in a reaction that is critical for transcriptional elongation. P-TEFb is related to, if not identical with, the CTD kinase TAK which is characterized by its ability to bind Tat. TAK and P-TEFb share at least one subunit, the CDC2-related kinase PITALRE. The major objectives of this grant are to evaluate the hypothesis that Tat acts via TAK/P-TEFb, and to extend it by examining the structure, function and regulation of these entities and characterizing their interactions with Tat. In addition, we propose to identify and study factor(s) responsible for potentiating Tat's ability to stimulate HIV-1 directed transcription in a cell-free system.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Project (R01)
Project #
5R01AI031802-08
Application #
2886723
Study Section
AIDS and Related Research Study Section 3 (ARRC)
Program Officer
Plaeger, Susan F
Project Start
1992-02-01
Project End
2002-03-31
Budget Start
1999-04-01
Budget End
2000-03-31
Support Year
8
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Medicine & Dentistry of NJ
Department
Biochemistry
Type
Schools of Medicine
DUNS #
605799469
City
Newark
State
NJ
Country
United States
Zip Code
07107
Hoque, Mainul; Tian, Bin; Mathews, Michael B et al. (2005) Granulin and granulin repeats interact with the Tat.P-TEFb complex and inhibit Tat transactivation. J Biol Chem 280:13648-57
Reza, Syed M; Shen, Lin-Ming; Mukhopadhyay, Rupa et al. (2003) A naturally occurring substitution in human immunodeficiency virus Tat increases expression of the viral genome. J Virol 77:8602-6
Hoque, Mainul; Young, Tara M; Lee, Chee-Gun et al. (2003) The growth factor granulin interacts with cyclin T1 and modulates P-TEFb-dependent transcription. Mol Cell Biol 23:1688-702
Young, Tara M; Wang, Qi; Pe'ery, Tsafi et al. (2003) The human I-mfa domain-containing protein, HIC, interacts with cyclin T1 and modulates P-TEFb-dependent transcription. Mol Cell Biol 23:6373-84
Reza, Syed M; Rosetti, Mihaela; Mathews, Michael B et al. (2003) Differential activation of Tat variants in mitogen-stimulated cells: implications for HIV-1 postintegration latency. Virology 310:141-56
Ramanathan, Y; Rajpara, S M; Reza, S M et al. (2001) Three RNA polymerase II carboxyl-terminal domain kinases display distinct substrate preferences. J Biol Chem 276:10913-20
Ramanathan, Y; Reza, S M; Young, T M et al. (1999) Human and rodent transcription elongation factor P-TEFb: interactions with human immunodeficiency virus type 1 tat and carboxy-terminal domain substrate. J Virol 73:5448-58
Gunnery, S; Ma, Y; Mathews, M B (1999) Termination sequence requirements vary among genes transcribed by RNA polymerase III. J Mol Biol 286:745-57
Greenberg, M E; Mathews, M B (1997) Effects of heterologous downstream sequences on the activity of the HIV-1 promoter and its response to Tat. Nucleic Acids Res 25:5017-24
Pe'ery, T; Mathews, M B (1997) Synthesis and purification of single-stranded RNA for use in experiments with PKR and in cell-free translation systems. Methods 11:371-81

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