Macrophages and related cells of the reticuloendothelial system play essential roles in host defense mechanisms against infectious disease and neoplasia. Abnormalities in macrophage development and function are implicated in the pathogenesis of a wide variety of human disease states, including certain leukemias, autoimmune diseases and atherosclerosis. The long term objectives of this proposal are to elucidate the molecular mechanisms by which receptors for retinoic acid and Vitamin D regulate macrophage development.
AIM 1 proposes to identify retinoic acid and Vitamin D-responsive genes in the human leukemia cell line, HL60, using subtractive hybridization strategies. These studies are expected to lead to the identification of genes that play important roles in the development and terminal differentiation of hematopoietic cells. Furthermore, characterization of the transcriptional control of these genes will be a prerequisite to the understanding of the mechanisms by which retinoic acid and Vitamin D exert tissue-specific effects on gene expression. Biochemical studies of HL60 cell nuclear proteins have led to the identification of two cell-specific factors that interact with the retinoic acid receptor to alter its sequence-specific DNA binding properties. The major hypothesis raised by this proposal is that these factors act to restrict and direct the actions of the retinoic acid receptor to the appropriate sets of target genes in hematopoietic cells.
AIM 2 proposes to characterize and clone these factors in order to test this hypothesis. The retinoic acid receptor interacts with these cell-specific factors via amino acid sequences that overlap with domains involved in ligand binding and transcriptional activation.
AIM 3 proposes to perform a mutational analysis of this protein-protein interaction interface in order to understand the relationship between these interactions and the transcriptional properties of the receptor. The proposed studies are likely to provide new insights into the mechanisms by which the retinoic acid and Vitamin D receptors influence the hierarchy of regulatory genes that act to specific cellular phenotype and control cell growth.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA052599-03
Application #
3197386
Study Section
Biochemical Endocrinology Study Section (BCE)
Project Start
1991-04-01
Project End
1996-03-31
Budget Start
1993-04-01
Budget End
1994-03-31
Support Year
3
Fiscal Year
1993
Total Cost
Indirect Cost
Name
University of California San Diego
Department
Type
Schools of Medicine
DUNS #
077758407
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Gosselin, David; Link, Verena M; Romanoski, Casey E et al. (2014) Environment drives selection and function of enhancers controlling tissue-specific macrophage identities. Cell 159:1327-40
Lam, Michael T Y; Cho, Han; Lesch, Hanna P et al. (2013) Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription. Nature 498:511-5
Xie, Lan; Sullivan, Amy L; Collier, Jana G et al. (2013) Serum response factor indirectly regulates type I interferon-signaling in macrophages. J Interferon Cytokine Res 33:588-96
Stender, Joshua D; Pascual, Gabriel; Liu, Wen et al. (2012) Control of proinflammatory gene programs by regulated trimethylation and demethylation of histone H4K20. Mol Cell 48:28-38
Escoubet-Lozach, Laure; Benner, Christopher; Kaikkonen, Minna U et al. (2011) Mechanisms establishing TLR4-responsive activation states of inflammatory response genes. PLoS Genet 7:e1002401
Huang, Wendy; Ghisletti, Serena; Saijo, Kaoru et al. (2011) Coronin 2A mediates actin-dependent de-repression of inflammatory response genes. Nature 470:414-8
Sullivan, Amy L; Benner, Christopher; Heinz, Sven et al. (2011) Serum response factor utilizes distinct promoter- and enhancer-based mechanisms to regulate cytoskeletal gene expression in macrophages. Mol Cell Biol 31:861-75
Saijo, Kaoru; Collier, Jana G; Li, Andrew C et al. (2011) An ADIOL-ER?-CtBP transrepression pathway negatively regulates microglia-mediated inflammation. Cell 145:584-95
Mercer, Elinore M; Lin, Yin C; Benner, Christopher et al. (2011) Multilineage priming of enhancer repertoires precedes commitment to the B and myeloid cell lineages in hematopoietic progenitors. Immunity 35:413-25
Lin, Yin C; Jhunjhunwala, Suchit; Benner, Christopher et al. (2010) A global network of transcription factors, involving E2A, EBF1 and Foxo1, that orchestrates B cell fate. Nat Immunol 11:635-43

Showing the most recent 10 out of 32 publications