It is proposed to study the androgen-responsive genes of mouse kidney as a model system to investigate naturally occurring polymorphism in eucaryotic gene structure and expression. For this, use will be made of a variety of cDNA clones that have ben isolated and shown to correspond to various androgen-inducible mRNAs from the kidney; initial focus will be on one such clone, pMK908, whose cDNA insert hybridizes to two RNAs, termed the 908 RNAs. It is one purpose of this proposal to characterize at molecular and genetic levels identified variation in the structure and quantity of the 908 RNAs. These studies will include determination of the molecular details of the inter-strain structural difference in the 908 RNAs, linkage analysis of genetic determinants for 908 RNA concentrations, and assay of the 908 gene transcription rate and its perturbation by genetic variation. In order to identify potentially novel variants for 908 gene expression, it is proposed to screen new stocks of wild-derived mice, which represent more divergent gene pools compared to laboratory inbred mice and therefore may be more highly polymorphic. To determine the possible interrelationships among the family of androgen-responsive genes, both laboratory inbred and wild-derived stocks will be screened for polymorphism in structure and expression of the other androgen-response genes for which probes are on hand; results for all the genes will be compared and correlations in variation among the genes will be looked for. An interesting Mus species, Mus caroli, that is resistant to androgen in the kidney, will be analyzed to obtain information concerning the evolution of the androgen response and the genetic factors that may potentiate it. Finally, since comparisons of the detailed genomic structures of these genes and variants thereof will be important in the long term, it is planned to begin the isolation and characterization of corresponding genomic clones. The proposed studies should provide information on the molecular and genetic nature of naturally-occurring mammalian polymorphism, and the mechanisms controlling eucaryotic gene expression.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK037265-03
Application #
3236091
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1986-01-01
Project End
1990-12-31
Budget Start
1988-01-01
Budget End
1988-12-31
Support Year
3
Fiscal Year
1988
Total Cost
Indirect Cost
Name
University of South Carolina at Columbia
Department
Type
Schools of Arts and Sciences
DUNS #
111310249
City
Columbia
State
SC
Country
United States
Zip Code
29208
Persson, K; Heby, O; Berger, F G (1999) The functional intronless S-adenosylmethionine decarboxylase gene of the mouse (Amd-2) is linked to the ornithine decarboxylase gene (Odc) on chromosome 12 and is present in distantly related species of the genus Mus. Mamm Genome 10:784-8
Singh, N; Barbour, K W; Berger, F G (1998) Evolution of transcriptional regulatory elements within the promoter of a mammalian gene. Mol Biol Evol 15:312-25
Singh, N; Berger, F G (1998) Evolution of a mammalian promoter through changes in patterns of transcription factor binding. J Mol Evol 46:639-48
Asadi, F K; Dimaculangan, D D; Berger, F G (1994) Androgen regulation of gene expression in primary epithelial cells of the mouse kidney. Endocrinology 134:1179-87
Johannes, G J; Berger, F G (1993) Domains within the mammalian ornithine decarboxylase messenger RNA have evolved independently and episodically. J Mol Evol 36:555-67
Johannes, G; Berger, F G (1992) Alterations in mRNA translation as a mechanism for the modification of enzyme synthesis during evolution. The ornithine decarboxylase model. J Biol Chem 267:10108-15
Chaudhuri, A; Barbour, K W; Berger, F G (1991) Evolution of messenger RNA structure and regulation in the genus Mus: the androgen-inducible RP2 mRNAs. Mol Biol Evol 8:641-53
Rhee, M; Dimaculangan, D; Berger, F G (1991) Androgen modulation of DNA-binding factors in the mouse kidney. Mol Endocrinol 5:564-72
Rheaume, C; Barbour, K W; Tseng-Crank, J et al. (1989) Molecular genetics of androgen-inducible RP2 gene transcription in the mouse kidney. Mol Cell Biol 9:477-83
Berger, F G (1989) Assignment of a gene encoding ornithine decarboxylase to the proximal region of chromosome 12 in the mouse. Biochem Genet 27:745-53

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