A 'classical' molecular genetic approach to mammalian gene expression involves the analysis of naturally-occurring variations among closely related strains or species. This approach is a powerful one from two perspectives. First, it identifies novel genomic alterations that modulate gene expression, thereby providing unique information on the molecular mechanisms governing gene activity. Second, in being essentially an evolutionary approach, it defines critical molecular targets for evolutionary change. Our laboratory has been studying renal gene expression in the mouse (genus Mus). The transcription rates of a number of genes are induced by androgens in the mouse kidney; importantly, extensive variations in the inducibility of these genes occur among Mus species, signalling the existence of gene- and species-- specific regulatory mutations. One such gene, called RP2, is differentially responsive to androgens in M. domesticus and M. caroli; based upon recent experimental results, we have proposed a molecular model to explain the inter-species difference. In the current application, we will focus on verifying and extending this model, using a variety of experimental strategies. We will examine DNA sequences near the RP2 gene and will define the nuclear proteins that bind them; M. domesticus and M. caroli will be compared in these regards. The DNA binding factors that we have proposed as responsible for the inter-species difference will be purified and characterized, their corresponding genes will be cloned, and their regulation will be analyzed at the level of mRNA. Several experimental systems for testing the function of regulatory elements that may be important to RP2 expression and its species-specific regulation in kidney will be developed. Finally, we will examine additional species within the Mus genus to gain insights into the nature and extent of evolutionary modification of molecular mechanisms for RP2 gene control. We believe that further studies of renal gene expression in mice will generate fundamental new information relating to the identity and action of molecular factors that control gene activity and that drive the evolution of species-specific regulatory mechanisms.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK037265-08
Application #
3236095
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1986-01-01
Project End
1995-02-28
Budget Start
1993-03-01
Budget End
1994-02-28
Support Year
8
Fiscal Year
1993
Total Cost
Indirect Cost
Name
University of South Carolina at Columbia
Department
Type
Schools of Arts and Sciences
DUNS #
111310249
City
Columbia
State
SC
Country
United States
Zip Code
29208
Persson, K; Heby, O; Berger, F G (1999) The functional intronless S-adenosylmethionine decarboxylase gene of the mouse (Amd-2) is linked to the ornithine decarboxylase gene (Odc) on chromosome 12 and is present in distantly related species of the genus Mus. Mamm Genome 10:784-8
Singh, N; Barbour, K W; Berger, F G (1998) Evolution of transcriptional regulatory elements within the promoter of a mammalian gene. Mol Biol Evol 15:312-25
Singh, N; Berger, F G (1998) Evolution of a mammalian promoter through changes in patterns of transcription factor binding. J Mol Evol 46:639-48
Asadi, F K; Dimaculangan, D D; Berger, F G (1994) Androgen regulation of gene expression in primary epithelial cells of the mouse kidney. Endocrinology 134:1179-87
Johannes, G J; Berger, F G (1993) Domains within the mammalian ornithine decarboxylase messenger RNA have evolved independently and episodically. J Mol Evol 36:555-67
Johannes, G; Berger, F G (1992) Alterations in mRNA translation as a mechanism for the modification of enzyme synthesis during evolution. The ornithine decarboxylase model. J Biol Chem 267:10108-15
Chaudhuri, A; Barbour, K W; Berger, F G (1991) Evolution of messenger RNA structure and regulation in the genus Mus: the androgen-inducible RP2 mRNAs. Mol Biol Evol 8:641-53
Rhee, M; Dimaculangan, D; Berger, F G (1991) Androgen modulation of DNA-binding factors in the mouse kidney. Mol Endocrinol 5:564-72
Berger, F G (1989) Assignment of a gene encoding ornithine decarboxylase to the proximal region of chromosome 12 in the mouse. Biochem Genet 27:745-53
Rheaume, C; Schonfeld, C; Porter, C et al. (1989) Evolution of androgen-regulated ornithine decarboxylase expression in mouse kidney. Mol Endocrinol 3:1243-51

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