The goal of the proposed research is to understand the mechanism and regulation of cellular responses to DNA damage. Exposure of Escherichia coli to a variety of carcinogens and mutagens elicits a diverse array of cellular responses often termed the SOS functions. A single step operon fusion technique will be used to fuse the beta-galactosidase gene to the regulatory regions of din (damage-inducible) genes. In these fusion strains beta-galactosidase has been shown to be inducible by ultraviolet light and mitomycin C in a recA plus lexA plus -dependent fashion. The regulation of these din genes will be studied by introducing other mutations which affect DNA repair and by isolating new mutations. The effect of a variety of treatments and conditions on the induction of beta-galactosidase will be examined in an effort to determine the cellular processes and signals controlling the expression of the SOS functions. The functions of the din genes will be deduced by examining the phenotypes of the fusion strains and by assaying for relevant enzymatic activities. Specialized transducing phage and small plasmids will be used to isolate the regulatory regions of the din genes. Molecular aspects of regulation will then be studied by sequencing these regions and examining their interaction with possible regulatory proteins. Specific results of the above studies will be used to improve the sophistication of short term bacterial genetic toxicity tests.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM028988-05
Application #
3276402
Study Section
(MG)
Project Start
1981-04-01
Project End
1986-03-31
Budget Start
1985-04-01
Budget End
1986-03-31
Support Year
5
Fiscal Year
1985
Total Cost
Indirect Cost
Name
Massachusetts Institute of Technology
Department
Type
Schools of Arts and Sciences
DUNS #
City
Cambridge
State
MA
Country
United States
Zip Code
Barthel, T K; Walker, G C (1999) Inferences concerning the ATPase properties of DnaK and other HSP70s are affected by the ADP kinase activity of copurifying nucleoside-diphosphate kinase. J Biol Chem 274:36670-8
Herman, C; Thevenet, D; Bouloc, P et al. (1998) Degradation of carboxy-terminal-tagged cytoplasmic proteins by the Escherichia coli protease HflB (FtsH). Genes Dev 12:1348-55
Zhang, J; Walker, G C (1998) Interactions of peptides with DnaK and C-terminal DnaK fragments studied using fluorescent and radioactive peptides. Arch Biochem Biophys 356:177-86
Zhang, J; Walker, G C (1996) Identification of elements of the peptide binding site of DnaK by peptide cross-linking. J Biol Chem 271:19668-74
Zhang, J; Lee, M H; Walker, G C (1995) P-azidoiodoacetanilide, a new short photocrosslinker that has greater cysteine specificity than p-azidophenacyl bromide and p-azidobromoacetanilide. Biochem Biophys Res Commun 217:1177-84
Donnelly, C E; Murli, S; Walker, G C (1994) The groE gene products of Escherichia coli are dispensable for mucA+B(+)-dependent UV mutagenesis. Mutat Res 309:225-33
McCarty, J S; Walker, G C (1994) DnaK mutants defective in ATPase activity are defective in negative regulation of the heat shock response: expression of mutant DnaK proteins results in filamentation. J Bacteriol 176:764-80
Bukau, B; Reilly, P; McCarty, J et al. (1993) Immunogold localization of the DnaK heat shock protein in Escherichia coli cells. J Gen Microbiol 139:95-9
Donnelly, C E; Walker, G C (1992) Coexpression of UmuD' with UmuC suppresses the UV mutagenesis deficiency of groE mutants. J Bacteriol 174:3133-9
McCarty, J S; Walker, G C (1991) DnaK as a thermometer: threonine-199 is site of autophosphorylation and is critical for ATPase activity. Proc Natl Acad Sci U S A 88:9513-7

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