Respiration in mammals is a primal homeostatic process, regulating levels of oxygen (O2) and carbon dioxide (CO2) in blood and tissues and is crucial for life. Rhythmic respiratory movements must occur continuously throughout life and originate from neural activity generated by specially organized circuits in the brain stem constituting the respiratory central pattern generator (CPG). The respiratory CPG generates rhythmic patterns of motor activity that produce coordinated movements of the respiratory pump (diaphragm, thorax, and abdomen), controlling lung inflation and deflation, and upper airway muscles, controlling airflow. These coordinated rhythmic movements drive exchange and transport of O2 and CO2 that maintain physiological homeostasis of the brain and body. Uncovering complex multilevel and multiscale mechanisms operating in the respiratory system, leading to mechanistic understanding of breathing, including breathing in different disease states requires a Physiome-type approach that relies on the development and explicit implementation of multiscale computational models of particular organs and physiological functions.
The specific aims of this multi-institutional project are: (1) develop a Physiome-type, predictive, multiscale computational model of neural control of breathing that links multiple physiological mechanisms and processes involved in the vital function of breathing but operating at different scales of functional and structural organization, (2) validate this model in a series of complementary experimental investigations and (3) use the model as a computational framework for formulating predictions about possible sources and mechanisms of respiratory pattern alteration associated with heart failure. The project brings together a multidisciplinary team of scientists with long standing collaboration and complementary expertise in respiration physiology, neuroscience and translational medical studies (Thomas E. Dick, Case Western Reserve University;Julian F.R. Paton, University of Bristol, UK;Robert F. Rogers, Drexel University;Jeffrey C. Smith, NINDS, NIH, intramural), mathematics, system analysis and bioengineering (Alona Ben-Tal, Massey University, NZ), and computational neuroscience and neural control (Ilya A. Rybak, Drexel University). The end result of our proposed cross-disciplinary modeling and experimental studies will be the development and implementation of a new, fully operational, multiscale model of the integrated neurophysiological control system for breathing based on the current state of physiological knowledge. This model can then be used as a computational framework for formulating predictions about possible neural mechanisms of respiratory diseases and suggesting possible treatments.

Public Health Relevance

The ultimate goal of this project is to develop a multiscale model of neural control of breathing that can be used as a computational framework for formulating predictions about possible neural mechanisms of respiratory diseases and suggesting possible treatments. The project will specially address respiration related problems associated with heart failure.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Project (R01)
Project #
5R01NS069220-04
Application #
8535256
Study Section
Modeling and Analysis of Biological Systems Study Section (MABS)
Program Officer
Liu, Yuan
Project Start
2010-09-01
Project End
2015-08-31
Budget Start
2013-09-01
Budget End
2014-08-31
Support Year
4
Fiscal Year
2013
Total Cost
$544,390
Indirect Cost
$105,127
Name
Drexel University
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
002604817
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Dick, T E; Dutschmann, M; Feldman, J L et al. (2018) Facts and challenges in respiratory neurobiology. Respir Physiol Neurobiol 258:104-107
Barnett, William H; Abdala, Ana P; Paton, Julian F R et al. (2017) Chemoreception and neuroplasticity in respiratory circuits. Exp Neurol 287:153-164
Molkov, Yaroslav I; Rubin, Jonathan E; Rybak, Ilya A et al. (2017) Computational models of the neural control of breathing. Wiley Interdiscip Rev Syst Biol Med 9:
Marchenko, Vitaliy; Koizumi, Hidehiko; Mosher, Bryan et al. (2016) Perturbations of Respiratory Rhythm and Pattern by Disrupting Synaptic Inhibition within Pre-Bötzinger and Bötzinger Complexes. eNeuro 3:
Bacak, Bartholomew J; Kim, Taegyo; Smith, Jeffrey C et al. (2016) Mixed-mode oscillations and population bursting in the pre-Bötzinger complex. Elife 5:e13403
Bacak, Bartholomew J; Segaran, Joshua; Molkov, Yaroslav I (2016) Modeling the effects of extracellular potassium on bursting properties in pre-Bötzinger complex neurons. J Comput Neurosci 40:231-45
Marvar, Paul J; Hendy, Emma B; Cruise, Thomas D et al. (2016) Systemic leukotriene B4 receptor antagonism lowers arterial blood pressure and improves autonomic function in the spontaneously hypertensive rat. J Physiol 594:5975-5989
Ghali, Michael George Zaki; Marchenko, Vitaliy (2016) Effects of vagotomy on hypoglossal and phrenic responses to hypercapnia in the decerebrate rat. Respir Physiol Neurobiol 232:13-21
Oliveira-Sales, Elizabeth B; Colombari, Eduardo; Abdala, Ana Paula et al. (2016) Sympathetic overactivity occurs before hypertension in the two-kidney, one-clip model. Exp Physiol 101:67-80
Abdala, Ana Paula; Toward, Marie A; Dutschmann, Mathias et al. (2016) Deficiency of GABAergic synaptic inhibition in the Kölliker-Fuse area underlies respiratory dysrhythmia in a mouse model of Rett syndrome. J Physiol 594:223-37

Showing the most recent 10 out of 66 publications