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Towse, Clare-Louise; Vymetal, Jiri; Vondrasek, Jiri et al. (2016) Insights into Unfolded Proteins from the Intrinsic ?/? Propensities of the AAXAA Host-Guest Series. Biophys J 110:348-361
|
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Towse, Clare-Louise; Rysavy, Steven J; Vulovic, Ivan M et al. (2016) New Dynamic Rotamer Libraries: Data-Driven Analysis of Side-Chain Conformational Propensities. Structure 24:187-199
|
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Bromley, Dennis; Rysavy, Steven J; Su, Robert et al. (2014) DIVE: a data intensive visualization engine. Bioinformatics 30:593-5
|
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Rysavy, Steven J; Beck, David A C; Daggett, Valerie (2014) Dynameomics: data-driven methods and models for utilizing large-scale protein structure repositories for improving fragment-based loop prediction. Protein Sci 23:1584-95
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Rysavy, Steven J; Bromley, Dennis; Daggett, Valerie (2014) DIVE: a graph-based visual-analytics framework for big data. IEEE Comput Graph Appl 34:26-37
|
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Merkley, Eric D; Rysavy, Steven; Kahraman, Abdullah et al. (2014) Distance restraints from crosslinking mass spectrometry: mining a molecular dynamics simulation database to evaluate lysine-lysine distances. Protein Sci 23:747-59
|
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Towse, Clare-Louise; Hopping, Gene; Vulovic, Ivan et al. (2014) Nature versus design: the conformational propensities of D-amino acids and the importance of side chain chirality. Protein Eng Des Sel 27:447-55
|
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Bromley, Dennis; Anderson, Peter C; Daggett, Valerie (2013) Structural consequences of mutations to the *-tocopherol transfer protein associated with the neurodegenerative disease ataxia with vitamin E deficiency. Biochemistry 52:4264-73
|
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McCully, Michelle E; Beck, David A C; Daggett, Valerie (2013) Promiscuous contacts and heightened dynamics increase thermostability in an engineered variant of the engrailed homeodomain. Protein Eng Des Sel 26:35-45
|
|
Rizzuti, Bruno; Daggett, Valerie (2013) Using simulations to provide the framework for experimental protein folding studies. Arch Biochem Biophys 531:128-35
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Showing the most recent 10 out of 32 publications
