Continuing support is requested for years 41-46 of the Yale Predoctoral Training Program in Human Genetics and Genomics. The program constitutes 44 trainers, the majority of whom are primary or secondary appointees in the Department of Genetics at the School of Medicine. Virtually all of the trainees over the last funding period have been matriculated in the Molecular Cell Biology, Genetics & Development Track (MCGD) in Biological and Biomedical Sciences at Yale. The proposed training program is focused on the use of genetic, genomic and computational approaches to understand human biology and disease. Training encompasses three core domains: 1) The genetics of human health and disease, encompassing disease gene discovery and the interpretation of human genetic variation; 2) Computational approaches to obtain biological insights from complex genomic datasets, both in human and model systems; and 3) Experimental studies in model organisms to understand how human genetic variation influences human biology and disease. Training faculty include investigators who are world leaders in each of these domains. This integrated training environment provides trainees with broad exposure to genetics, genomics and computational biology, and a rich training environment that prepares them for careers in science. Students admitted into the program have strong scientific backgrounds and research experience with high academic achievement. First year students are supported by Yale. Students are then supported by the training grant in years 2 and 3, and thereafter by funds in Training Faculty laboratories until graduation. Training in the first year includes formal course work focused on genetics, genomics and data analysis, as well as research rotations leading to selection of the thesis advisor and laboratory. In the second year, students complete course work and take a qualifying exam in which they must demonstrate mastery of genetics and defend two written research proposals. Subsequent years are devoted to dissertation research, development of experimental and analytic skills, and skills in written and oral presentation, leading to preparation and publication of the thesis work. In addition, students engage in supervised teaching experiences. The students also participate in Program-specific activities, including a Program Retreat, a Program Symposium, dedicated Research-in-Progress talks, and a Program Seminar Series. These activities provide students with targeted mentoring and career development opportunities and will help them develop a professional network of peers and senior colleagues that they can draw upon throughout their careers. Support is requested for 5 years for 7 Ph.D. students per year. Trainees are highly successful in completing their Ph.D. thesis work, publishing their work in high-impact journals, and the vast majority continue to contribute to science after leaving the program.

Public Health Relevance

Rapid and inexpensive DNA sequencing technologies have revolutionized medicine by revealing the landscape of mutations that contribute to human disease. Over the next decade, whole genome sequencing of many thousands of individuals, coupled with novel genome editing approaches to determine the impact of specific human mutations in experimental model systems, will provide unprecedented insight into disease mechanisms and empower new strategies for prevention, diagnosis and treatment. This training program will train the next generation of scientists to be able to take full advantage of this sea change in human genetics and prepare them for productive careers in science that will lead to improved human health.

Agency
National Institute of Health (NIH)
Institute
Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD)
Type
Institutional National Research Service Award (T32)
Project #
5T32HD007149-42
Application #
9998977
Study Section
Special Emphasis Panel (ZHD1)
Program Officer
Parisi, Melissa
Project Start
1978-07-01
Project End
2024-04-30
Budget Start
2020-05-01
Budget End
2021-04-30
Support Year
42
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Yale University
Department
Genetics
Type
Schools of Medicine
DUNS #
043207562
City
New Haven
State
CT
Country
United States
Zip Code
06520
Sarro, Richard; Kocher, Acadia A; Emera, Deena et al. (2018) Disrupting the three-dimensional regulatory topology of the Pitx1 locus results in overtly normal development. Development 145:
Endicott, S Joseph; Brueckner, Martina (2018) NUP98 Sets the Size-Exclusion Diffusion Limit through the Ciliary Base. Curr Biol 28:1643-1650.e3
DeMille, Mellissa M C; Tang, Kevin; Mehta, Chintan M et al. (2018) Worldwide distribution of the DCDC2 READ1 regulatory element and its relationship with phoneme variation across languages. Proc Natl Acad Sci U S A 115:4951-4956
Griffin, John N; Sondalle, Samuel B; Robson, Andrew et al. (2018) RPSA, a candidate gene for isolated congenital asplenia, is required for pre-rRNA processing and spleen formation in Xenopus. Development 145:
Sulkowski, Parker L; Scanlon, Susan E; Oeck, Sebastian et al. (2018) PTEN Regulates Nonhomologous End Joining By Epigenetic Induction of NHEJ1/XLF. Mol Cancer Res 16:1241-1254
van Dijk, David; Sharma, Roshan; Nainys, Juozas et al. (2018) Recovering Gene Interactions from Single-Cell Data Using Data Diffusion. Cell 174:716-729.e27
Scanlon, Susan E; Hegan, Denise C; Sulkowski, Parker L et al. (2018) Suppression of homology-dependent DNA double-strand break repair induces PARP inhibitor sensitivity in VHL-deficient human renal cell carcinoma. Oncotarget 9:4647-4660
Tao, T; Sondalle, S B; Shi, H et al. (2017) The pre-rRNA processing factor DEF is rate limiting for the pathogenesis of MYCN-driven neuroblastoma. Oncogene 36:3852-3867
Yartseva, Valeria; Takacs, Carter M; Vejnar, Charles E et al. (2017) RESA identifies mRNA-regulatory sequences at high resolution. Nat Methods 14:201-207
Paolini, Nahuel A; Attwood, Martin; Sondalle, Samuel B et al. (2017) A Ribosomopathy Reveals Decoding Defective Ribosomes Driving Human Dysmorphism. Am J Hum Genet 100:506-522

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