In an effort to further extend the number of targets for development of anti-retroviral agents, we are studying HIV-1 integrase inhibitors using in vitro assays using recombinant enzyme and short oligonucleotides corresponding to the proviral ends (LTR?s). Integrase is a rationale target for inhibitor development because it is essential for viral replication. It is also encoded by HIV and does not have a cellular equivalent. Our laboratory has pioneered this research field and reported various families of inhibitors.We have continued our studies on polyhydroxylated aromatics with Dr. Burke. Because one of them, caffeoylquinic acid is antiviral, we performed structure-activity studies on chicoric acid analogs. We found that blocking the catechol functionality through conversion to tetraacetate esters results in almost no loss of potency, contingent of the presence of at least one carboxyl group on the central linker. Taken as a whole, our work has resulted in the identification of new integrase inhibitors, which may be regarded as bis-caffeoyl derivatives with antiviral activity.We also discovered a novel family of HIV integrase inhibitors, the thiazolothiazepine that are non-catechol inhibitors. Remarkably, these thiolothiazepine derivatives are active in magnesium (considered to be the physiological divalent cation) as well as in maganese-based assays (which are more robust in vitro). They are antiviral without inhibiting other retroviral targets besides integrase. Further work will be needed to determine whether integrase is the only in vivo target of this new class of drugs.We are also studying novel types of inhibitors that can prevent integration by binding to the proviral DNA ends as well as small peptide and nucleotide inhibitors. - AIDS, chemotherapy, DNA binding protein, HIV, Pharmacology, Retroviruses,

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Intramural Research (Z01)
Project #
1Z01BC007333-08
Application #
6289186
Study Section
Special Emphasis Panel (LMP)
Project Start
Project End
Budget Start
Budget End
Support Year
8
Fiscal Year
1999
Total Cost
Indirect Cost
Name
National Cancer Institute Division of Basic Sciences
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Zhao, Xue Zhi; Smith, Steven J; Maskell, Daniel P et al. (2017) Structure-Guided Optimization of HIV Integrase Strand Transfer Inhibitors. J Med Chem 60:7315-7332
Métifiot, Mathieu; Johnson, Barry C; Kiselev, Evgeny et al. (2016) Selectivity for strand-transfer over 3'-processing and susceptibility to clinical resistance of HIV-1 integrase inhibitors are driven by key enzyme-DNA interactions in the active site. Nucleic Acids Res 44:6896-906
Zhao, Xue Zhi; Smith, Steven J; Maskell, Daniel P et al. (2016) HIV-1 Integrase Strand Transfer Inhibitors with Reduced Susceptibility to Drug Resistant Mutant Integrases. ACS Chem Biol 11:1074-81
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Pescatori, Luca; Métifiot, Mathieu; Chung, Suhman et al. (2015) N-Substituted Quinolinonyl Diketo Acid Derivatives as HIV Integrase Strand Transfer Inhibitors and Their Activity against RNase H Function of Reverse Transcriptase. J Med Chem 58:4610-23
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Sari, Ozkan; Roy, Vincent; Métifiot, Mathieu et al. (2015) Synthesis of dihydropyrimidine ?,?-diketobutanoic acid derivatives targeting HIV integrase. Eur J Med Chem 104:127-38
Métifiot, Mathieu; Johnson, Barry; Smith, Steven et al. (2011) MK-0536 inhibits HIV-1 integrases resistant to raltegravir. Antimicrob Agents Chemother 55:5127-33
Metifiot, Mathieu; Maddali, Kasthuraiah; Naumova, Alena et al. (2010) Biochemical and pharmacological analyses of HIV-1 integrase flexible loop mutants resistant to raltegravir. Biochemistry 49:3715-22
Johnson, Allison A; Marchand, Christophe; Patil, Sachindra S et al. (2007) Probing HIV-1 integrase inhibitor binding sites with position-specific integrase-DNA cross-linking assays. Mol Pharmacol 71:893-901

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