We have developed a comprehensive lung tissue microarray that included 300 NSCLC cases and 183 neuroendocrine tumors including small cell lung cancers, large cell neuroendocrine tumors, and carcinoid tumors. The availability of the patient survival information in a majority of the cases allowed us to systematically evaluate candidate protein markers for lung cancer diagnosis and prognosis. In a recent study, we showed that one of the core chromosome remodeling factors, BRM has prognostic value in NSCLC. Nuclear BRM (N-BRM) expression correlated with a better prognosis for both SqCa and AD with 5 year-survival of 53.5% vs. 32.3% (p=0.015). In contrast, membranous BRM (M-BRM) staining correlated with a poorer prognosis in AD with a 5 year-survival of 16.7% vs. 38.1% (p=0.016). In addition, collaboration with investigators within CCR has led to new discoveries regarding protein expression and survival such as AKT activation in NSCLC, Desmoglein 3 expression in carcinoid tumors as well as the discovery of previously unknown associations between interesting proteins, such as SMAD nuclear inducible protein 1 (SNIP1) and RB. We intend to use this unique resource to develop a comprehensive protein expression profile for lung cancer and anticipate that this unique resource will lead to many fruitful collaborations with researchers both inside and outside of NCI.

Agency
National Institute of Health (NIH)
Institute
Division of Cancer Epidemiology And Genetics (NCI)
Type
Intramural Research (Z01)
Project #
1Z01CP010164-04
Application #
7066220
Study Section
(LPG)
Project Start
Project End
Budget Start
Budget End
Support Year
4
Fiscal Year
2004
Total Cost
Indirect Cost
Name
Cancer Epidemiology and Genetics
Department
Type
DUNS #
City
State
Country
United States
Zip Code
Gill, R K; Yang, S-H; Meerzaman, D et al. (2011) Frequent homozygous deletion of the LKB1/STK11 gene in non-small cell lung cancer. Oncogene 30:3784-91
Ozbudak, Irem H; Shilo, Konstantin; Tavora, Fabio et al. (2009) Glucose transporter-1 in pulmonary neuroendocrine carcinomas: expression and survival analysis. Mod Pathol 22:633-8
Fukuoka, Junya; Dracheva, Tatiana; Shih, Joanna H et al. (2007) Desmoglein 3 as a prognostic factor in lung cancer. Hum Pathol 38:276-83
Hong, Kyeong-Man; Yang, Sei-Hoon; Chowdhuri, Sinchita Roy et al. (2007) Inactivation of LLC1 gene in nonsmall cell lung cancer. Int J Cancer 120:2353-8
Dracheva, Tatiana; Philip, Reena; Xiao, Wenming et al. (2007) Distinguishing lung tumours from normal lung based on a small set of genes. Lung Cancer 55:157-64
Tsurutani, Junji; Fukuoka, Junya; Tsurutani, Hiroko et al. (2006) Evaluation of two phosphorylation sites improves the prognostic significance of Akt activation in non-small-cell lung cancer tumors. J Clin Oncol 24:306-14
He, Ping; Varticovski, Lyuba; Bowman, Elise D et al. (2004) Identification of carboxypeptidase E and gamma-glutamyl hydrolase as biomarkers for pulmonary neuroendocrine tumors by cDNA microarray. Hum Pathol 35:1196-209
Krop, Ian; Player, Audrey; Tablante, Ana et al. (2004) Frequent HIN-1 promoter methylation and lack of expression in multiple human tumor types. Mol Cancer Res 2:489-94
Fukuoka, Junya; Fujii, Takeshi; Shih, Joanna H et al. (2004) Chromatin remodeling factors and BRM/BRG1 expression as prognostic indicators in non-small cell lung cancer. Clin Cancer Res 10:4314-24
Player, Audrey; Gillespie, John; Fujii, Takeshi et al. (2003) Identification of TDE2 gene and its expression in non-small cell lung cancer. Int J Cancer 107:238-43