The lens depends for its function on the accumulation of large amounts of a modest number of proteins. These include cytoplasmic crystallins, specialized membrane proteins and intermediate filaments. For more than thirty years it has been assumed that the genes encoding these proteins are """"""""turned on"""""""" during the formation of lens fiber cells, the cells that make up the bulk of the lens. However, the data presented in this proposal show that the RNAs encoding these """"""""fiber-specific"""""""" proteins are synthesized early in lens formation and are present in the progenitor cells of the lens, the lens epithelial cells, throughout life. Since these mRNAs are present, but the proteins that they encode are not, there must be mechanisms that determine when and in what cells these mRNAs are translated into protein. Our data suggest that selective translation of these mRNAs is governed by protein-RNA complexes called RNA granules (RGs). We propose to identify the major genes that are regulated in the lens by post-transcriptional mechanisms, determine the RG components and RNA sequences required to regulate the expression of an abundant lens membrane protein, MIP, and to identify the lens-specific RG components that are responsible for the selective translation of the """"""""fiber cell-specific"""""""" mRNAs throughout lens development and in postnatal life. We expect that these studies will define a new paradigm for lens gene expression and will serve as a model for post-transcriptional regulation of gene expression in other tissues. Since mutation of one lens-specific RG component, TDRD7, causes human cataracts, these studies will also provide fundamental information about cataract formation.

Public Health Relevance

Cataracts are the leading cause of blindness worldwide. Preserving lens transparency would, therefore, have major public health implications. To preserve transparency, one must understand the reasons that the lens is transparent in the first place. Substantial research has shown that the proteins that accumulate in the lens to very high levels, the lens crystallins, are required for the refractive properties and transparency of the lens. Until recently, it has been thought that the accumulation of crystallin proteins is regulated by differential gene transcription (messenger RNA synthesis). Our data show that this is only partially correct. We found that many crystallin genes are expressed as messenger RNAs in all lens cells, but these messenger RNAs are not translated into proteins. Therefore, a major component of the lens that is required for its function is regulated by a previously unsuspected mechanism. The purpose of this proposal is to understand the mechanisms that regulate mRNA translation in the lens. These studies will identify causes of hereditary cataracts, lead to a better understanding of how differential gene expression assures lens transparency and how gene expression might be regulated to preserve lens function.

Agency
National Institute of Health (NIH)
Institute
National Eye Institute (NEI)
Type
Research Project (R01)
Project #
5R01EY021505-03
Application #
8445324
Study Section
Anterior Eye Disease Study Section (AED)
Program Officer
Araj, Houmam H
Project Start
2011-04-01
Project End
2015-03-31
Budget Start
2013-04-01
Budget End
2014-03-31
Support Year
3
Fiscal Year
2013
Total Cost
$454,092
Indirect Cost
$155,347
Name
Washington University
Department
Ophthalmology
Type
Schools of Medicine
DUNS #
068552207
City
Saint Louis
State
MO
Country
United States
Zip Code
63130
Budak, Gungor; Dash, Soma; Srivastava, Rajneesh et al. (2018) Express: A database of transcriptome profiles encompassing known and novel transcripts across multiple development stages in eye tissues. Exp Eye Res 168:57-68
Kakrana, Atul; Yang, Andrian; Anand, Deepti et al. (2018) iSyTE 2.0: a database for expression-based gene discovery in the eye. Nucleic Acids Res 46:D875-D885
Siddam, Archana D; Gautier-Courteille, Carole; Perez-Campos, Linette et al. (2018) The RNA-binding protein Celf1 post-transcriptionally regulates p27Kip1 and Dnase2b to control fiber cell nuclear degradation in lens development. PLoS Genet 14:e1007278
Krall, M; Htun, S; Anand, D et al. (2018) A zebrafish model of foxe3 deficiency demonstrates lens and eye defects with dysregulation of key genes involved in cataract formation in humans. Hum Genet 137:315-328
Anand, Deepti; Agrawal, Smriti A; Slavotinek, Anne et al. (2018) Mutation update of transcription factor genes FOXE3, HSF4, MAF, and PITX3 causing cataracts and other developmental ocular defects. Hum Mutat 39:471-494
Srivastava, Rajneesh; Budak, Gungor; Dash, Soma et al. (2017) Transcriptome analysis of developing lens reveals abundance of novel transcripts and extensive splicing alterations. Sci Rep 7:11572
Anand, Deepti; Lachke, Salil A (2017) Systems biology of lens development: A paradigm for disease gene discovery in the eye. Exp Eye Res 156:22-33
Wang, Yichen; Terrell, Anne M; Riggio, Brittany A et al. (2017) ?1-Integrin Deletion From the Lens Activates Cellular Stress Responses Leading to Apoptosis and Fibrosis. Invest Ophthalmol Vis Sci 58:3896-3922
Patel, Nisha; Anand, Deepti; Monies, Dorota et al. (2017) Novel phenotypes and loci identified through clinical genomics approaches to pediatric cataract. Hum Genet 136:205-225
Cavalheiro, Gabriel R; Matos-Rodrigues, Gabriel E; Zhao, Yilin et al. (2017) N-myc regulates growth and fiber cell differentiation in lens development. Dev Biol 429:105-117

Showing the most recent 10 out of 23 publications