Cytoplasmic dynein is poorly understood in vitro, which makes it hard to understand its function and regulation in vivo. For instance, because its single-molecule properties are not known, it is unclear what roles various accessory proteins might need to play in order to achieve correct in vivo function. Further, although some in vivo evidence suggests that multiple dynein motors work together (and with dynactin), the functional significance of employing multiple motors is unknown. We address these questions by studying dynein function in a controlled environment, first at the single-molecule level and then in increasingly complex situations. We will employ an in vitro bead assay that uses an optical trap to quantify how single---or multiple--dynein molecules move along microtubules, both in the presence or absence of proteins that might alter dynein function such as dynactin and MAPs. Initial results published in a recent paper showed that Dynein functions in a fundamentally different manner than kinesin, and appears to have a gear mechanism enabling it to adjust force production to meet external applied load. Further, our unpublished preliminary results suggest that unlike kinesin, at the single molecule level dynein is not a very good efficient cargo transporter. The research will fully investigate dynein's single-molecule function (aim 1), clarify how this function can be altered (aims 2 and 3), and further study how the proposed gear might function (aim 4). We proposed the following specific aims:
Aim 1 : Elucidate the single-molecule functions of dynein, combining measurements including force-velocity curve, processivity vs load, dependence of function on ATP, etc. with modeling.
Aim 2 : Determine how multiple dyneins function together Aim 3: Determination of the role of some accessory proteins in regulating altering dynein function. Investigate the functional ramifications of the presence of the dynactin complex and or MAPs. Is a single dynein-dynactin pair an effective transport system ? Do MAPs impair motor-driven transport? Aim 4: Test our hypothesis explaining the gear's function Understanding dynein is directly related to public health: correct dynein function and regulation is essential for development, alteration of dynein function likely occurs in many cancers, and dynein and dynactin mutations cause neuronal degeneration.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM070676-04
Application #
7386620
Study Section
Synapses, Cytoskeleton and Trafficking Study Section (SYN)
Program Officer
Deatherage, James F
Project Start
2005-03-01
Project End
2010-02-28
Budget Start
2008-03-01
Budget End
2010-02-28
Support Year
4
Fiscal Year
2008
Total Cost
$234,307
Indirect Cost
Name
University of California Irvine
Department
Anatomy/Cell Biology
Type
Schools of Arts and Sciences
DUNS #
046705849
City
Irvine
State
CA
Country
United States
Zip Code
92697
Shojania Feizabadi, Mitra; Janakaloti Narayanareddy, Babu Reddy; Vadpey, Omid et al. (2015) Microtubule C-Terminal Tails Can Change Characteristics of Motor Force Production. Traffic 16:1075-87
Tripathy, Suvranta K; Weil, Sarah J; Chen, Chen et al. (2014) Autoregulatory mechanism for dynactin control of processive and diffusive dynein transport. Nat Cell Biol 16:1192-201
Jun, Yonggun; Tripathy, Suvranta K; Narayanareddy, Babu R J et al. (2014) Calibration of optical tweezers for in vivo force measurements: how do different approaches compare? Biophys J 107:1474-84
Sigua, Robilyn; Tripathy, Suvranta; Anand, Preetha et al. (2012) Isolation and purification of kinesin from Drosophila embryos. J Vis Exp :
Xu, Jing; Shu, Zhanyong; King, Stephen J et al. (2012) Tuning multiple motor travel via single motor velocity. Traffic 13:1198-205
Yi, Julie Y; Ori-McKenney, Kassandra M; McKenney, Richard J et al. (2011) High-resolution imaging reveals indirect coordination of opposite motors and a role for LIS1 in high-load axonal transport. J Cell Biol 195:193-201
McKenney, Richard J; Vershinin, Michael; Kunwar, Ambarish et al. (2010) LIS1 and NudE induce a persistent dynein force-producing state. Cell 141:304-14
Ori-McKenney, Kassandra M; Xu, Jing; Gross, Steven P et al. (2010) A cytoplasmic dynein tail mutation impairs motor processivity. Nat Cell Biol 12:1228-34
Ziebert, F; Vershinin, M; Gross, S P et al. (2009) Collective alignment of polar filaments by molecular motors. Eur Phys J E Soft Matter 28:401-9
Kunwar, Ambarish; Vershinin, Michael; Xu, Jing et al. (2008) Stepping, strain gating, and an unexpected force-velocity curve for multiple-motor-based transport. Curr Biol 18:1173-83

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